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4015 - 15540
Homo sapiens - Deletions

Deletion length: 11524 bp

Removes OL
Removing part of minor and major arcs



Breakpoint flanking sequences
more information in Documentation - Flanking regions


4015
5fl vs 3del
Homology length: 9 bp

Deleted region


15540
CATTATTATAATAAACACCC 5'Breakpoint TCACCACTACAATCTTCCTA (...) AGCCAACCCCTTAAACACCC 3'Breakpoint CTCCCCACATCAAGCCCGAA
5fl vs 3fl
Homology length: 1 bp

CATTATTATAATAAACACCC 5'Breakpoint TCACCACTACAATCTTCCTA (...) AGCCAACCCCTTAAACACCC 3'Breakpoint CTCCCCACATCAAGCCCGAA




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [330] Volmering, E., et al., Neuropathological signs of inflammation correlate with mitochondrial DNA deletions in mesial temporal lobe epilepsy. Acta Neuropathologica. 2016. 132(2): p. 277-288.